DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and zgc:64051

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_956665.1 Gene:zgc:64051 / 393342 ZFINID:ZDB-GENE-040426-1349 Length:221 Species:Danio rerio


Alignment Length:240 Identity:64/240 - (26%)
Similarity:106/240 - (44%) Gaps:41/240 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVAVICFLG 70
            |.|:||:....|.:|.:.|..||.: |:..:.::..|...|....:....|.|.|..:..:.|||
Zfish     4 LKCLKYIMCVVNFIFFICGAAIFGM-GIYLMTFSRLSLLPSLQAMSIANTLFITGIIITCVSFLG 67

  Fly    71 CCGALKESSCMILSFALLAVVIFLFEIGLG---------LAGYVKH---TGLHQIMES--QFNST 121
            ..|||||:.|:::||.:|..::.|.|:...         :..::|.   .||:|.:::  |.|:|
Zfish    68 FLGALKENRCLLISFFILLFILMLAELAAACLMLMYESKIENFIKDDLVDGLNQSIKNRKQHNTT 132

  Fly   122 MQHYKERADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQH 186
                       |.|..:|....||||....||:     ..:|.:|    |:|..   :|.|   .
Zfish   133 -----------DDWDKVQETFGCCGIQNATDWQ-----GFVPQSC----NISGT---SNWH---K 171

  Fly   187 GCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFRRS 231
            ||.:.|....:|..|.....|:.|..|::|.:.|:..|:....||
Zfish   172 GCFKLLENSFESNLLSTGIGVIVVCIIEVLGMCFSMTLFCHINRS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 60/230 (26%)
tetraspanin_LEL 131..>167 CDD:351888 10/35 (29%)
zgc:64051NP_956665.1 Tetraspanin 7..211 CDD:459767 60/230 (26%)
CD53_like_LEL 101..189 CDD:239417 27/113 (24%)

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