DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Tsp42En

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster


Alignment Length:222 Identity:46/222 - (20%)
Similarity:91/222 - (40%) Gaps:42/222 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVAVICFLGCCG 73
            :|.:....|:|.:|.|:.:..: .:.:||.:....|  :|:  |.::.:.||..|.:..||||..
  Fly     8 LKAVLIVLNVLLSLIGVTLIAL-SVYELNSSTPGTF--EHI--AIVVQIFVGTFVVLTSFLGCFA 67

  Fly    74 ALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERADYRDAW--- 135
            ..:.|..::.|:.:..:::...:|.:..|.:               ||....:.:.|:...|   
  Fly    68 TARVSLGLVWSYVICLLILLCLQIYIIAAAH---------------STDYVERSKKDFLATWADQ 117

  Fly   136 -------TLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSE-------AKECTNTHATQH 186
                   :||:.:..|||..|.:|:..:.|.  :|.:|.......|       ..:....|||.:
  Fly   118 RTNVERISLLEQKYSCCGQLGAHDYILMGRG--IPLSCYKDQERREYSLFSGGCLQAVQAHATDN 180

  Fly   187 ---GCLQKLLEILDSKTLILASVVLGV 210
               |.:.|.|.:|.....:.|:..||:
  Fly   181 VAIGLIIKWLLLLVEFAALGAATHLGI 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 46/222 (21%)
tetraspanin_LEL 131..>167 CDD:351888 10/45 (22%)
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 28/146 (19%)
tetraspanin_LEL 96..180 CDD:239401 19/100 (19%)

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