DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Tsp42Ek

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_523637.1 Gene:Tsp42Ek / 35621 FlyBaseID:FBgn0033133 Length:215 Species:Drosophila melanogaster


Alignment Length:239 Identity:57/239 - (23%)
Similarity:96/239 - (40%) Gaps:42/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMI----VGAAVAVICF 68
            |||......|.|.||:||.:..:..:.              :..|||..::    :|..:.|...
  Fly     7 CVKCFLNTLNTLNALSGLSLIAIATLA--------------LSKAPIAYILFLYGLGGIIFVSAV 57

  Fly    69 LGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQ-HYKERADYR 132
            |||||...|:.||..::..|    .|.::.:.|.|..:.....:.:|......:| .:.|.....
  Fly    58 LGCCGICMENVCMTATYGFL----LLAQLIISLLGIFRFKFTEEYIEKFAAEEVQMKWDEELVEP 118

  Fly   133 DAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQHGCLQKLLEILD 197
            .|..:.||..:|||.:.|:|:..:.| .|||.:|..    .|..:..:..|   ||:||..|   
  Fly   119 GAMDIYQTVYECCGRDSPDDYVAIGR-QTLPPSCYP----QEDPQMPHYLA---GCVQKSSE--- 172

  Fly   198 SKTLILAS-------VVLGVAGIQMLTILFACCLYRSFRRSYDH 234
             ..::|.|       :.||:..:.|:...:....:|..|..|.:
  Fly   173 -NFVVLFSYAHDTNWIALGITILMMIAAFYLVGRFRKQRVRYTY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 53/228 (23%)
tetraspanin_LEL 131..>167 CDD:351888 12/35 (34%)
Tsp42EkNP_523637.1 Tetraspanin 8..>132 CDD:459767 32/141 (23%)
tetraspanin_LEL 94..174 CDD:239401 23/91 (25%)

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