DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Tsp42Ek

DIOPT Version :9

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001246161.1 Gene:Tsp42Ek / 35621 FlyBaseID:FBgn0033133 Length:215 Species:Drosophila melanogaster


Alignment Length:239 Identity:57/239 - (23%)
Similarity:96/239 - (40%) Gaps:42/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMI----VGAAVAVICF 68
            |||......|.|.||:||.:..:..:.              :..|||..::    :|..:.|...
  Fly     7 CVKCFLNTLNTLNALSGLSLIAIATLA--------------LSKAPIAYILFLYGLGGIIFVSAV 57

  Fly    69 LGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQ-HYKERADYR 132
            |||||...|:.||..::..|    .|.::.:.|.|..:.....:.:|......:| .:.|.....
  Fly    58 LGCCGICMENVCMTATYGFL----LLAQLIISLLGIFRFKFTEEYIEKFAAEEVQMKWDEELVEP 118

  Fly   133 DAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQHGCLQKLLEILD 197
            .|..:.||..:|||.:.|:|:..:.| .|||.:|..    .|..:..:..|   ||:||..|   
  Fly   119 GAMDIYQTVYECCGRDSPDDYVAIGR-QTLPPSCYP----QEDPQMPHYLA---GCVQKSSE--- 172

  Fly   198 SKTLILAS-------VVLGVAGIQMLTILFACCLYRSFRRSYDH 234
             ..::|.|       :.||:..:.|:...:....:|..|..|.:
  Fly   173 -NFVVLFSYAHDTNWIALGITILMMIAAFYLVGRFRKQRVRYTY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 54/230 (23%)
tetraspanin_LEL 104..200 CDD:239401 23/96 (24%)
Tsp42EkNP_001246161.1 Tetraspannin 7..202 CDD:278750 54/224 (24%)
tetraspanin_LEL 94..174 CDD:239401 23/91 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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