DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp39D and Tsp42Ei

DIOPT Version :9

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001260756.1 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster


Alignment Length:244 Identity:63/244 - (25%)
Similarity:110/244 - (45%) Gaps:48/244 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVAVICFL 69
            |.|.||::....|.:|::.||.:...|....::.|  .|.||.....|..:::.:|..:.:|...
  Fly     4 GATTVKHVLLLLNFVFSVLGLALIAFGIFFLISAA--ENAVSIGKNVAGGLIIALGVVILIIAIF 66

  Fly    70 GCCGALKESSCMILSFA------LLAVVIFLFEIGL-------GLAGYVKHTGLHQIMESQFNST 121
            ||..|:.|:...:|.:.      :||.:|||   |:       |::|.: :.|..::.||:.|.|
  Fly    67 GCLAAIHEAPVRLLIYVGAVVLLILAQLIFL---GMSSHGTKDGISGSI-NEGFDRLWESERNQT 127

  Fly   122 MQHYKERADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNT--HAT 184
                 ....|.::|      |.|||:|...|:..::..  :|::||     .|:| |.:|  ...
  Fly   128 -----GALSYYESW------LQCCGVNSSEDYWIIHHG--IPSSCC-----PESK-CMDTPSRVF 173

  Fly   185 QHGCLQKLLEILDSKTLILASV----VLGVAGIQMLTILFACCLYRSFR 229
            :.||....::.||.|.|:...|    |:|.|    :..:|...||.|.:
  Fly   174 KTGCKAAFVKYLDDKLLVFKIVCWLLVIGEA----VGAVFGWLLYSSVK 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 60/237 (25%)
tetraspanin_LEL 104..200 CDD:239401 24/97 (25%)
Tsp42EiNP_001260756.1 Tetraspannin 7..217 CDD:278750 60/238 (25%)
DUF373 <17..>101 CDD:299895 22/88 (25%)
tetraspanin_LEL 104..189 CDD:239401 26/104 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.