DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Tsp42Ee

DIOPT Version :9

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:245 Identity:67/245 - (27%)
Similarity:122/245 - (49%) Gaps:43/245 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GLTCVKYLTFFCNLLFALTGLLIFLVG-------GMVQLNYAHYSNFVSDHVWT-APIILMIVGA 61
            |.:.|||:.|..|.:.::.|:|..:.|       |:|::|     ..|...:.. .||||:.:|:
  Fly     4 GTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVN-----GQVGFPIQALMPIILISLGS 63

  Fly    62 AVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVK----HTGLHQIMESQFNSTM 122
            .|..|.|||||||::||.||.:|:|...:::.:.::...:..:..    ...:..::|:.:||  
  Fly    64 IVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNS-- 126

  Fly   123 QH-YKERADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKEC---TNTHA 183
            :| ||     ...:..:|..|.|||.:...|:  :.:...:|.:|||       ..|   ||.:.
  Fly   127 EHTYK-----GGVFDTIQKSLHCCGSSSALDY--IGKGDLVPPSCCS-------GSCLIPTNYYP 177

  Fly   184 TQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCL---YRSFRR 230
               ||..|.:|::.:.:.....|.:|:.||:::..:|||||   .|:::|
  Fly   178 ---GCRGKFVELMTTGSDNAKYVGIGLIGIELIGFIFACCLANNVRNYKR 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 64/237 (27%)
tetraspanin_LEL 104..200 CDD:239401 23/103 (22%)
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 64/234 (27%)
tetraspanin_LEL 106..187 CDD:239401 23/99 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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