DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Tsp42Ed

DIOPT Version :9

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster


Alignment Length:236 Identity:69/236 - (29%)
Similarity:119/236 - (50%) Gaps:20/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYS----NFVSDHVWTAPIILMIVGA 61
            |..||: .|||:.|..|:||.:.|:|:...|.::......:|    .|.::.|   .||::::|.
  Fly     1 MDCGGV-FVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSV---AIIILVLGC 61

  Fly    62 AVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYK 126
            .|.::.|:|||||::|:||.:.|::::.:|:.:.::.|.:..:|.|..:.|.:|....:.....|
  Fly    62 VVFLVAFMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTIWDQRK 126

  Fly   127 ERADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHA-TQHGCLQ 190
            ..|...|.   ||....|||:||..|:...|     ||:||   :......|..|.. |:..||:
  Fly   127 TDALLMDT---LQRSFKCCGLNGFADYGITY-----PASCC---DSPSNGTCALTQVMTRSSCLK 180

  Fly   191 KLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFRRS 231
            .:....|:...|:....|||..::::..:|||||....|.|
  Fly   181 AVDSFWDTNVSIIKYAGLGVTAVELVAFIFACCLANQTRNS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspannin 8..227 CDD:278750 64/223 (29%)
tetraspanin_LEL 104..200 CDD:239401 26/96 (27%)
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 64/222 (29%)
tetraspanin_LEL 104..189 CDD:239401 26/95 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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