DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and cd9a

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:XP_005159038.1 Gene:cd9a / 322455 ZFINID:ZDB-GENE-030131-1175 Length:228 Species:Danio rerio


Alignment Length:242 Identity:63/242 - (26%)
Similarity:107/242 - (44%) Gaps:36/242 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SGGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDH----VWTAPIILMIVGAAV 63
            :||..|||||.|..|.:|.:.|..:..||..::.:....|.|..::    .:|...||:..||.:
Zfish     5 TGGEMCVKYLMFVFNFIFWIAGTAVLAVGLWLRFDPKTKSLFEGENSPYVFYTGVYILIAAGALM 69

  Fly    64 AVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKE- 127
            .|:.|.|||||::||.||:..|....:|||..|:..|:.|:...|.:.:.:.:.:..|...|:: 
Zfish    70 MVVGFFGCCGAIQESPCMLGLFFFFLLVIFAVEVAAGIWGFSNQTKVTEDITTFYRQTYDTYQQS 134

  Fly   128 -RADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEA--KECTNTHATQH--- 186
             :...:....|.|..|:|||.:|                     |:.|:  :.|.......:   
Zfish   135 KQEALKKTLRLFQHGLNCCGPSG---------------------NMQESLDETCPKKEGLDNLII 178

  Fly   187 -GCLQKLLEILDSKTLILASVVLGVAGIQMLTILFA---CCLYRSFR 229
             .|...:.|:.:||..|:..|.:....|.:..::|:   ||..|..|
Zfish   179 KSCPDAIDEVFNSKLHIIGGVGIATGVIMIFGMIFSMMLCCAIRKTR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 58/231 (25%)
tetraspanin_LEL 131..>167 CDD:351888 7/35 (20%)
cd9aXP_005159038.1 Tetraspanin 11..219 CDD:459767 56/228 (25%)
CD9_LEL 110..193 CDD:239405 16/103 (16%)

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