Protein Alignment Tsp39D and Tspan18

DIOPT Version :10

• Sequence 1: NP_523612.3
• Gene: Tsp39D / 35405
• FlyBaseID: FBgn0032943
• Length: 235
• Species: Drosophila melanogaster
• Sequence 2: NP_001101220.1
• Gene: Tspan18 / 311210
• RGDID: 1560411
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 245
• Identity: 66/245 - (26%)
• Similarity: 118/245 - (48%)
• Gaps: 23/245 - (9%)

  Fly     6 LTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDH--VWTAPIILMIVGAAVAVICF 68
            |:|:|||.|..|....|.|..:..||..|.::...:...|:.:  :.|...:::.:|..:.::.|
  Rat     6 LSCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYVVLAMGGLLFLLGF 70

  Fly    69 LGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERAD--- 130
            ||||||::|:.|::|.|.|..::|||.|:...:..::...  |...|.......:||:...|
  Rat    71 LGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFRE--HLTREFFTKELTKHYQGDNDTDV 133

  Fly   131 YRDAWTLLQTELDCCGINGPNDWE--TVYRNSTL-----PAACCS---------VINLSEAKECT 179
            :...|..:.....|||:|||.|::  :|:|..||     |.|||.         |::..|.:...
  Rat   134 FSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSREECQLGR 198

  Fly   180 NTHATQHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFR 229
            |....:.||...:|...::...:..:..:||..|::..::||.||:|..:
  Rat   199 NPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp39D	NP_523612.3	Tetraspanin	9..226	CDD:459767	63/237 (27%)
		tetraspanin_LEL	131..>167	CDD:351888	14/42 (33%)
Tspan18	NP_001101220.1	Tetraspanin	10..245	CDD:459767	63/236 (27%)
		uroplakin_I_like_LEL	105..218	CDD:239409	27/114 (24%)