DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and LOC1275496

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:XP_061516540.1 Gene:LOC1275496 / 1275496 VectorBaseID:AGAMI1_000373 Length:285 Species:Anopheles gambiae


Alignment Length:232 Identity:61/232 - (26%)
Similarity:122/232 - (52%) Gaps:13/232 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAVAVICFLG 70
            :.||||:.|..::.||:...::..:...:...:..:.||:..|.:..|.:|:.:|..:.||...|
Mosquito    12 MKCVKYMIFVISITFAVVAAMLLSMAVAIGNLFDDFQNFIDSHFFVPPNLLIAIGIILLVIALFG 76

  Fly    71 CCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKERADYRDAW 135
            |.||||||:.||..:..|.:::|:.::...:..:|....:..::..:...:|..||::..||:..
Mosquito    77 CVGALKESTAMINIYGALLLIVFVLQLAAAITAFVLRGQVSMMVRQKIFDSMGDYKQQDGYRNPI 141

  Fly   136 TLLQTELDCCGINGPNDW-ETVYRNSTL---PAACCSV--INLSEAKECTNTHATQHGCLQKLLE 194
            ..||..|:|||::|.:|| :.:..:.|:   |..||:.  :|    .||.   ..::||..:|..
Mosquito   142 DTLQNTLECCGVDGFSDWAQFLPSDGTVMEYPETCCAAPPVN----GECM---PREYGCYSRLSW 199

  Fly   195 ILDSKTLILASVVLGVAGIQMLTILFACCLYRSFRRS 231
            ::...::::|:..:.||.:|:|..:.|..|..:.||:
Mosquito   200 LISQGSVLIATGTVAVAFVQVLGAVCAFMLASAIRRA 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 58/222 (26%)
tetraspanin_LEL 131..>167 CDD:351888 13/39 (33%)
LOC1275496XP_061516540.1 None

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