DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and LOC1270595

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:XP_309308.4 Gene:LOC1270595 / 1270595 VectorBaseID:AGAMI1_010016 Length:233 Species:Anopheles gambiae


Alignment Length:240 Identity:69/240 - (28%)
Similarity:112/240 - (46%) Gaps:24/240 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGGL-----TCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVSDHVWT-----APII 55
            |.|||.     .||||..|..|.:..|.|.::|.:|....::    .:|:::.:.|     |..:
Mosquito     1 MGSGGRMDCCGQCVKYSMFVANFVIFLGGAIVFSLGIWTLVD----KHFINELLGTNLFSGAVYV 61

  Fly    56 LMIVGAAVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNS 120
            |:...|.|.::.|.||.||.||..||:|::.:|..:||:..:..|:.|||....:.|.|..:..|
Mosquito    62 LIATSALVCLLSFFGCMGAAKEYKCMLLTYFILVFLIFVTMLIGGILGYVFREKVSQTMGDEMRS 126

  Fly   121 TMQHYKERADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQ 185
            :|..|..|.....||...|..|.|||:...:||     ...:|.:||. ..|...|.|....:.:
Mosquito   127 SMSLYGSRRSITTAWDETQERLKCCGVRSYSDW-----RGDIPQSCCQ-RTLDGYKPCIENPSPE 185

  Fly   186 ----HGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYR 226
                :|||:.....:.....|:....:|||.:.:..::|:|.|:|
Mosquito   186 NIYINGCLEITSSYIRDNAAIIGGAGIGVAVLLIFGMIFSCSLFR 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 63/225 (28%)
tetraspanin_LEL 131..>167 CDD:351888 10/35 (29%)
LOC1270595XP_309308.4 Tetraspanin 14..230 CDD:459767 63/225 (28%)
NET-5_like_LEL 110..203 CDD:239418 26/98 (27%)

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