DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp39D and Cd82

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_031682.1 Gene:Cd82 / 12521 MGIID:104651 Length:266 Species:Mus musculus


Alignment Length:262 Identity:64/262 - (24%)
Similarity:111/262 - (42%) Gaps:45/262 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGGLTCVKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFV------SDHVWTAPIILMIV 59
            |.:|.:...||..|..||||.:.|.:|...|..:   .|..::|:      |..:.....:.:.|
Mouse     1 MGAGCVKVTKYFLFLFNLLFFILGAVILGFGVWI---LADKNSFISVLQTSSSSLQVGAYVFIGV 62

  Fly    60 GAAVAVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQH 124
            ||...|:.||||.||:.|..|::..:.:..::|.:.::.:|:..|.....|.:.|.:.....:::
Mouse    63 GAITIVMGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFYFNADKLKKEMGNTVMDIIRN 127

  Fly   125 YKERA--DYRDAWTLLQTELDCCGINGPNDW----ETV-YRNSTLPAACCSVINLSEAKE----- 177
            |...|  ...:||..:|.::.|||.....:|    |.: :..:|.|.:|      .:.||     
Mouse   128 YTANATSSREEAWDYVQAQVKCCGWVSHYNWTENEELMGFTKTTYPCSC------EKIKEEDNQL 186

  Fly   178 ------CTNTHAT------------QHGCLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCL 224
                  |...::|            ..||::|....|.....||..|..|||.|::|.:..:.||
Mouse   187 IVKKGFCEADNSTVSENNPEDWPVNTEGCMEKAQAWLQENFGILLGVCAGVAVIELLGLFLSICL 251

  Fly   225 YR 226
            .|
Mouse   252 CR 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 61/252 (24%)
tetraspanin_LEL 131..>167 CDD:351888 10/40 (25%)
Cd82NP_031682.1 Tetraspanin 24..253 CDD:459767 54/237 (23%)
CD37_CD82_like_LEL 106..228 CDD:239413 24/127 (19%)

Return to query results.
Submit another query.