DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Cd53

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_031677.1 Gene:Cd53 / 12508 MGIID:88341 Length:219 Species:Mus musculus


Alignment Length:226 Identity:72/226 - (31%)
Similarity:112/226 - (49%) Gaps:22/226 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGGLTCVKYLTFFCNLLFALTG--LLIFLVGGMVQLNYAHYSNFVSDHVWTAPIILMIVGAAV 63
            |....|..:||:.|..||||.:.|  :|.|.:..:||..|...  |.:....|...||:|||:.:
Mouse     1 MGMSSLKLLKYVLFIFNLLFWVCGCCILGFGIYFLVQNTYGVL--FRNLPFLTLGNILVIVGSII 63

  Fly    64 AVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLAGYVKHTGLHQIMESQFNSTMQHYKER 128
            .|:.||||.|::||:.|:::||.:|.::|.|.|:.:.:..:|....|:.::....|.::|||...
Mouse    64 MVVAFLGCMGSIKENKCLLMSFFVLLLIILLAEVTIAILLFVYEQKLNTLVAEGLNDSIQHYHSD 128

  Fly   129 ADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECTNTHATQHGCLQKLL 193
            .....||..:||:|.|||:||.:||     .|..|::|.|             .|...||..|..
Mouse   129 NSTMKAWDFIQTQLQCCGVNGSSDW-----TSGPPSSCPS-------------GADVQGCYNKAK 175

  Fly   194 EILDSKTLILASVVLGVAGIQMLTILFACCL 224
            ....|..|.:..:.:.|..||:|.:.||..|
Mouse   176 SWFHSNFLYIGIITICVCVIQVLGMSFALTL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 70/218 (32%)
tetraspanin_LEL 131..>167 CDD:351888 14/35 (40%)
Cd53NP_031677.1 Tetraspanin 9..208 CDD:459767 70/218 (32%)
CD53_like_LEL 104..186 CDD:239417 28/99 (28%)

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