DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp39D and Tsp68C

DIOPT Version :10

Sequence 1:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster
Sequence 2:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster


Alignment Length:276 Identity:62/276 - (22%)
Similarity:103/276 - (37%) Gaps:80/276 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSN----------FVSDHVWTAP---IILMIVGA 61
            |::...||.||.:.|||: :|.|:    |....|          ..||.:.:.|   :..:.:|.
  Fly     8 KFVLNLCNFLFLICGLLL-VVSGL----YIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGV 67

  Fly    62 AV--------AVICFLGCCGALKESSCMILSFALLAVVIFLFEIGLGLA--------GY-VKHTG 109
            |:        ||:.|...|   ..:.|.:..:.|..||:.|.|..|.||        |. :..|.
  Fly    68 AIAGFVATLAAVVGFWASC---LHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGISLDETQ 129

  Fly   110 LHQIMESQFNSTMQHYKERADYRDAWTLLQTELDCCGINGPNDWETV--------YRNSTLPAAC 166
            :.:.::|.:....|.     .:.:|..|.|....|||:....|::|.        .||..:|.:|
  Fly   130 MVRSLQSNYGVPGQE-----QFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWPVPLSC 189

  Fly   167 CSVIN----------------LSEAKECTNTHATQH--GCLQKL-------LEILDSKTLILASV 206
            |.:.|                :.::.|..:....:|  .||..|       ..|....:||||.:
  Fly   190 CFLKNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYSIFLGASLILAMI 254

  Fly   207 VLGVAGIQMLTILFAC 222
            ...|    :|.|:.:|
  Fly   255 EFCV----LLAIIMSC 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 62/276 (22%)
tetraspanin_LEL 131..>167 CDD:351888 11/43 (26%)
Tsp68CNP_729926.1 Tetraspanin 8..>161 CDD:459767 38/165 (23%)
tetraspanin_LEL 117..241 CDD:239401 23/128 (18%)

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