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Protein Alignment dimm and Twist1
DIOPT Version :9
Sequence 1: | NP_001260674.1 |
Gene: | dimm / 35404 |
FlyBaseID: | FBgn0023091 |
Length: | 390 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445982.1 |
Gene: | Twist1 / 85489 |
RGDID: | 621455 |
Length: | 203 |
Species: | Rattus norvegicus |
Alignment Length: | 178 |
Identity: | 54/178 - (30%) |
Similarity: | 79/178 - (44%) |
Gaps: | 25/178 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 SSRPVRRATRRTSQLSNNTYDLEMTDSSS--------QSDDTSGGGGSSNGGGSTTNTGHPSGCS 101
||.||..| ...|||:..:.:....:| :|...|.|| |.|.|..|..|...|..
Rat 6 SSSPVSPA---DDSLSNSEEEPDRQQPASGKRGARKRRSSRRSAGG--SAGPGGATGGGIGGGDE 65
Fly 102 LGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNASRRRKGALNAKERNMRRLESNERER 166
.|......||:......|. |........|::.|.:.: :.:|...:|:.:|.|||
Rat 66 PGSPAQGKRGKKSAGGGGG-----AGGGGGGGGSSSGGGSPQ------SYEELQTQRVMANVRER 119
Fly 167 MRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILS 214
.|..|||:||.:||::||.:..: :||||:||.||..||..|..::.|
Rat 120 QRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQS 166
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
dimm | NP_001260674.1 |
HLH |
154..208 |
CDD:238036 |
25/53 (47%) |
Twist1 | NP_445982.1 |
HLH |
110..160 |
CDD:278439 |
25/50 (50%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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