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Protein Alignment dimm and Msgn1
DIOPT Version :9
Sequence 1: | NP_001260674.1 |
Gene: | dimm / 35404 |
FlyBaseID: | FBgn0023091 |
Length: | 390 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001103021.1 |
Gene: | Msgn1 / 689864 |
RGDID: | 1587516 |
Length: | 187 |
Species: | Rattus norvegicus |
Alignment Length: | 189 |
Identity: | 52/189 - (27%) |
Similarity: | 80/189 - (42%) |
Gaps: | 36/189 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 NGLSSESAEG---------SSRPVRRATRRTSQLSNNTYDLEMTDSSSQSDDTSGGGGSSNGGGS 90
:||.|....| .:||:.......:|..:....|| |.|:.....|..|:|. |||
Rat 13 DGLDSSDTTGLLASWDWKSRARPLELIQASPTQSLSPVPSLE---SYSEVALPCGHSGAST-GGS 73
Fly 91 TTNTGHPSGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNASRRRKGALNAKERN 155
...:.|.:| |...:..:.....||.| :|.|.. :.:||: ..|...
Rat 74 DGYSSHEAG---------GLVELDYSMLAFQPSYI----------HAAGGL-KGQKGS-KVKMSV 117
Fly 156 MRRLESNERERMRMHSLNDAFQSLREVIPHVEMER--RLSKIETLTLAKNYIINLTHII 212
.||.:::|||::||.:|.||..:||..:|.|..:| .|:||:||.....||..||.::
Rat 118 QRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIRELTDLL 176
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
dimm | NP_001260674.1 |
HLH |
154..208 |
CDD:238036 |
22/55 (40%) |
Msgn1 | NP_001103021.1 |
HLH |
119..173 |
CDD:278439 |
22/53 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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