DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Olig1

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_068538.2 Gene:Olig1 / 60394 RGDID:621129 Length:261 Species:Rattus norvegicus


Alignment Length:228 Identity:66/228 - (28%)
Similarity:87/228 - (38%) Gaps:67/228 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 PSGRGRVQQASS-----GACPSTIAPNSTSSNSSNAN------------------GNASRRRKGA 148
            |...|.||..:|     |.....|:.:|::|:||.|:                  |.|.......
  Rat    20 PQRPGDVQLGASLYELVGYRQPPISSSSSTSSSSTASLLPKPAREKPEAPLAEPRGPAPESGGAR 84

  Fly   149 LNAKERNMR---RLESNERERMRMHSLNDAFQSLREVI-PHVEME------RRLSKIETLTLAKN 203
            .:|||...:   |.:.|.|||.||..||.|..:||||| |:....      |:||||.||.||:|
  Rat    85 ADAKEEQQQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKIATLLLARN 149

  Fly   204 YIINLTHIILSKRNEEA------------AALELNSGAVGGVLLSNLSSESGGPVASGIPANSNA 256
            ||:.|...:...|....            |.|.|.:.|.|.|||:        |.|.|.|.....
  Rat   150 YILLLGSSLQELRRALGDGAGPAAPRLLLAGLPLLAAAPGSVLLA--------PGAVGPPETLRP 206

  Fly   257 ATI---------CFEDTLASGGA-----FDCAI 275
            ...         |.:..|.:|||     ..||:
  Rat   207 TKYLSLALDEPPCGQFALPAGGAGSPGLCSCAV 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 29/68 (43%)
Olig1NP_068538.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..105 14/63 (22%)
bHLH_TS_OLIG1 96..165 CDD:381512 30/68 (44%)

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