DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and olig3

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001103863.1 Gene:olig3 / 566728 ZFINID:ZDB-GENE-080903-1 Length:255 Species:Danio rerio


Alignment Length:227 Identity:65/227 - (28%)
Similarity:93/227 - (40%) Gaps:61/227 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 NSTSSNSSN-----ANGNASRRRKGA-------LNAKERNMRRLESNERERMRMHSLNDAFQSLR 180
            ||.||..:.     |:.:.|:...|:       :..:|....||:.|.|||.|||.||.|...||
Zfish    34 NSVSSTQNELLQKMASEHLSKTPSGSKYKLKKQVTEQEIQQLRLKINGRERKRMHDLNLAMDGLR 98

  Fly   181 EVIP--HVEMERRLSKIETLTLAKNYIINLTHIILSKRNEEAAALELNSGAVGGVLLSNLSSESG 243
            ||:|  |....|:||||.||.||:|||:.||           ::|:.....||.:...:.|:...
Zfish    99 EVMPYAHGPSVRKLSKIATLLLARNYILMLT-----------SSLDEMKRLVGEIYGGHHSAFHC 152

  Fly   244 GPVASGIPANSNAATICFEDTLASGGAFDCAILAATDGSLLNAATVTT--SPAMQSIQS-QAIHL 305
            |.|:.|...::.||.......|               ||.|:.:|.:|  .|.:.||:: ..:..
Zfish   153 GTVSHGGAHSAGAAHQVHHPLL---------------GSALSGSTSSTLSLPGLTSIRAPHTLMK 202

  Fly   306 QTPMEQQQQQASHLPHHQQAMHGHGHLGASIQ 337
            .||....|                  ||.|.|
Zfish   203 STPTPPLQ------------------LGGSFQ 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 32/60 (53%)
olig3NP_001103863.1 bHLH_TS_OLIG3 60..140 CDD:381511 34/90 (38%)

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