DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Neurod2

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_062199.2 Gene:Neurod2 / 54276 RGDID:3166 Length:382 Species:Rattus norvegicus


Alignment Length:269 Identity:79/269 - (29%)
Similarity:108/269 - (40%) Gaps:82/269 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 RRRKGALNAKERN-MRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYII 206
            ::||......||: :||.::|.|||.|||.||.|..:||:|:|.....::|||||||.||||||.
  Rat   107 KKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIW 171

  Fly   207 NLTHIILS-KR-------------------NEEAAALELNS-------GAVGGVLLSNLSSESGG 244
            .|:.|:.| ||                   |..|..|:|||       ||.|    :.....|||
  Rat   172 ALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADG----AGRFHGSGG 232

  Fly   245 PVAS---GIPANSNAATICFEDTLASGG----------------AFDCAILAATDGSLLNAATVT 290
            |.|.   ..|.:..|...|    .|:||                |::....||..|.        
  Rat   233 PFAMHPYPYPCSRLAGAQC----QAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGG-------- 285

  Fly   291 TSPAMQSIQSQAIHLQTPM-----EQQQQQASHLPHHQQAMHGHGHLGASIQSQQQPSLVLNGTT 350
            .||...|.:.:. .|..|:     ...:|.:|  |.|:::.|...|..|           |.|:.
  Rat   286 ASPDYNSSEYEG-PLSPPLCLNGNFSLKQDSS--PDHEKSYHYSMHYSA-----------LPGSR 336

  Fly   351 SVGLGIGIG 359
            ..|.|:..|
  Rat   337 PAGHGLVFG 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 32/59 (54%)
Neurod2NP_062199.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..129 7/21 (33%)
bHLH_TS_NeuroD2 88..180 CDD:381563 35/72 (49%)
Nuclear localization signal. /evidence=ECO:0000255 107..113 2/5 (40%)
Neuro_bHLH 180..310 CDD:463621 31/146 (21%)

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