DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Bhlhe23

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001102681.1 Gene:Bhlhe23 / 499952 RGDID:1559760 Length:223 Species:Rattus norvegicus


Alignment Length:229 Identity:72/229 - (31%)
Similarity:96/229 - (41%) Gaps:59/229 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SNGGGSTTNT-----GHPSGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNAS-- 142
            |:|..:|::.     |..:....|..||.|       ...|.|::..|.:|..:|...:|:..  
  Rat    16 SHGYAATSHAYAAARGPETTRGFGASGPGG-------DLPAAPASRVPAATVESSGEQSGDEDEA 73

  Fly   143 ----RRRKG---ALNA----KERNMRRLESNERERMRMHSLNDAFQSLREVIP--HVEMERRLSK 194
                |||:|   |::|    :|:...||..|.|||.|||.||||...||.|||  |....|:|||
  Rat    74 FERRRRRRGPGVAVDARRRPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSK 138

  Fly   195 IETLTLAKNYIINLTHIILSKRNEEAAALE--------LNSGAVGGVLLSNLSSESGGPVASG-I 250
            |.||.||||||:           .:|.|||        ||.|           .....|||:. :
  Rat   139 IATLLLAKNYIL-----------MQAQALEEMRRLVAYLNQG-----------QSLAAPVAAAPL 181

  Fly   251 PANSNAATICFEDTLASGGAFD-CAILAATDGSL 283
            .....||...|....|.|...| ||..:.:..:|
  Rat   182 TPFGQAAVYPFTAGAALGPCPDKCATFSGSPSAL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 32/60 (53%)
Bhlhe23NP_001102681.1 bHLH_TS_bHLHe22_bHLHb5 99..168 CDD:381524 37/79 (47%)

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