DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and olig3

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001008191.1 Gene:olig3 / 493553 XenbaseID:XB-GENE-919789 Length:263 Species:Xenopus tropicalis


Alignment Length:266 Identity:67/266 - (25%)
Similarity:90/266 - (33%) Gaps:100/266 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 SSNSSNANGNASRRR-KGALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIP--HVEMERRL 192
            |.:.|...|.:|:.: |..|:.::....||:.|.|||.|||.||.|...||||:|  |....|:|
 Frog    52 SKHGSRGEGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKL 116

  Fly   193 SKIETLTLAKNYIINLTHIILSKRNEEAAALELNSGAVGGVLLSNLSSESGGPVASGIPANSNAA 257
            |||.||.||:|||:.||           ::||.....||.:.        ||             
 Frog   117 SKIATLLLARNYILMLT-----------SSLEEMKRLVGEIY--------GG------------- 149

  Fly   258 TICFEDTLASGGAFDCAILAATDGSLLNAATVTTSPAMQSIQSQAIHLQTPMEQQQQQASHLPHH 322
                     ...||.|..:.                                    ..|:|..|.
 Frog   150 ---------HHSAFHCGTVG------------------------------------HSANHPVHP 169

  Fly   323 QQAMHG-HGHLGASIQSQQQPSLVLN----GT---------------TSVGLGIGIGVGVGVGVG 367
            ..|.|. |..||:|:.|....||..:    ||               .|:|.|.....|:.....
 Frog   170 PNAAHQVHPILGSSLCSNTPSSLSASLPGIGTIRPAHSLLKTPSTPPLSIGSGFQHWAGLPCPCT 234

  Fly   368 VCNNAP 373
            :|...|
 Frog   235 ICQMPP 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 32/60 (53%)
olig3NP_001008191.1 bHLH_SF 64..144 CDD:469605 36/90 (40%)

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