DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Fer2

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster


Alignment Length:220 Identity:62/220 - (28%)
Similarity:82/220 - (37%) Gaps:69/220 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SSRPVRRATRRTSQLSNNTYDLEMTD--------SSSQSDDTSGGGGSSNGGG-------STTNT 94
            ||.|:       |.|..:.:|.::.:        ...|....:||||.|.|||       |:.|.
  Fly    11 SSPPI-------SHLPFHNFDDDLINDLPSCIYAGQHQGGGATGGGGGSGGGGGSSGLRLSSNNL 68

  Fly    95 GH-------------------PSGCSLGGQG-------PSGRGRVQQASSGACPSTIAPNSTSSN 133
            .|                   |.|....|.|       ||.     .:|.|.|     .|:.|:.
  Fly    69 RHIQQHYMQHSGENLLDSSTNPMGVHNSGGGAPLMCNSPSA-----SSSGGGC-----GNAGSAT 123

  Fly   134 SSNANG-NASRRRKGALNAKERNMRRLESNERERMRMH----------SLNDAFQSLREVIPHVE 187
            ...|.| |......||..|....|:|..:|.|||.|:.          |:|.||..||..:|...
  Fly   124 PGGAGGPNPGYGSVGAATASSYKMQRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFP 188

  Fly   188 MERRLSKIETLTLAKNYIINLTHII 212
            .|:|||||:||.||..||..|..::
  Fly   189 YEKRLSKIDTLRLAIAYISLLREVL 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 26/66 (39%)
Fer2NP_001287359.1 bHLH_SF 144..216 CDD:469605 27/70 (39%)

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