DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and twist1

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_989415.1 Gene:twist1 / 395054 XenbaseID:XB-GENE-479802 Length:166 Species:Xenopus tropicalis


Alignment Length:108 Identity:37/108 - (34%)
Similarity:61/108 - (56%) Gaps:7/108 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SGRGRVQQASSGACP-STIAPNSTSSNSSNANGNASRRRKGALNAKERNMRRLESNERERMRMHS 171
            |.||..::.|:...| ...:|.|...|..:::..:|.:     :.:|...:|:.:|.|||.|..|
 Frog    28 SKRGCRKKRSTRKSPEDPDSPISVKRNKKSSSTGSSPQ-----SFEELQSQRVMANVRERQRTQS 87

  Fly   172 LNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILS 214
            ||:||.:||::||.:..: :||||:||.||..||..|..::.|
 Frog    88 LNEAFAALRKIIPTLPSD-KLSKIQTLKLASRYIDFLCQVLQS 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 27/58 (47%)
twist1NP_989415.1 bHLH_SF 67..138 CDD:469605 28/64 (44%)

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