DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and cato

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_477344.1 Gene:cato / 36813 FlyBaseID:FBgn0024249 Length:189 Species:Drosophila melanogaster


Alignment Length:217 Identity:59/217 - (27%)
Similarity:94/217 - (43%) Gaps:41/217 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SSESAEGSSRPVRRATRRTSQLSNNTYDLEMTDSSSQSDDTSGGGGSSN------GGGSTTNTGH 96
            |:...:|||:          .|.:..|:|......|..|...|...|..      .||:.|..  
  Fly     7 SASEEDGSSQ----------YLGSPNYNLTQLPPVSGQDYGQGAFLSPEWQFLDAAGGTQTEL-- 59

  Fly    97 PSGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNASRRRKGALNAKERNMRRLES 161
                     ||....:.|...    |.|   ...|::.:.::|..|...:..|:...:..||..:
  Fly    60 ---------GPIMEAQGQHTQ----PQT---KRRSNSFTGSDGRKSSPEQTNLSPTVQKRRRQAA 108

  Fly   162 NERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILSKRNE-EAAALEL 225
            |.|||.||:.||.||:.||||:|...::::|||.|||.:|::||:.|..::.:...| :|||..:
  Fly   109 NARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQSYILALCDLLNNGDVEVDAAAYTI 173

  Fly   226 NSGAVGGVLLSNLSSESGGPVA 247
            ...:..|..|      |||.::
  Fly   174 FGDSDSGFGL------SGGSLS 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 27/58 (47%)
catoNP_477344.1 bHLH_TS_ATOH1_like 104..159 CDD:381436 27/54 (50%)

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