DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Atoh7

DIOPT Version :9

Sequence 1:NP_001260674.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001163953.1 Gene:Atoh7 / 365564 RGDID:1304957 Length:149 Species:Rattus norvegicus


Alignment Length:117 Identity:42/117 - (35%)
Similarity:55/117 - (47%) Gaps:27/117 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 PSGCSLGGQG-PSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNASRRRKGALNAKERNMRRLE 160
            |.|...|.:| |...|..::|.|.|.|                        |.|.:..|  |||.
  Rat     7 PHGPPAGARGAPPCAGAAERAVSCAGP------------------------GRLESAAR--RRLA 45

  Fly   161 SNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHII 212
            :|.|||.||..||.||..||.|:|....:::|||.|||.:|.:||:.||.|:
  Rat    46 ANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIVALTRIL 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_001260674.1 HLH 154..208 CDD:238036 27/53 (51%)
Atoh7NP_001163953.1 HLH 54..99 CDD:197674 21/44 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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