DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Ascl5

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001385517.1 Gene:Ascl5 / 363991 RGDID:1561854 Length:188 Species:Rattus norvegicus


Alignment Length:221 Identity:52/221 - (23%)
Similarity:83/221 - (37%) Gaps:46/221 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SSNGGGSTTNTGHPSGCSLGGQGPSGRGRVQQASS-GACPSTIAPNSTSSNSSNANGNASR--RR 145
            :||...:..:.|.|.|..||...|:|...:..... |..|..:.|..:..:..:|......  ..
  Rat     2 NSNFCRALVDRGSPGGIQLGVVAPAGPTPLAATEPLGNVPFLLYPGHSEPSYYDAYTGVFPYVPF 66

  Fly   146 KGALNAKERNMRRL---ESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIIN 207
            .||....:......   :.|||||.|:..:|:.:..||..:|....|:||||:|||..|..||..
  Rat    67 PGAFGVYDYPFEPAFIQKRNERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKY 131

  Fly   208 LTHIILSKRNEEAAALELNSGAVGGVLLSNLSSESGGPVASGIPANSNAATICFEDTLASGGAFD 272
            |..                       |||  ::..|.|..:..|..::|         ..|.|..
  Rat   132 LQE-----------------------LLS--AAPDGAPPTATSPPPAHA---------GHGNALQ 162

  Fly   273 -CAILAATDGSLLNAATVTTSPAMQS 297
             .:::|.:.||     :.:.||.::|
  Rat   163 PPSLVAESSGS-----SFSPSPFLES 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 22/61 (36%)
Ascl5NP_001385517.1 bHLH_TS_ASCL5 76..136 CDD:381590 22/82 (27%)

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