DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dimm and hlh-32

DIOPT Version :9

Sequence 1:NP_001260674.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001023430.1 Gene:hlh-32 / 3565279 WormBaseID:WBGene00013665 Length:105 Species:Caenorhabditis elegans


Alignment Length:90 Identity:42/90 - (46%)
Similarity:50/90 - (55%) Gaps:19/90 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 RLESNERERMRMHSLNDAFQSLREVIP--HVEMERRLSKIETLTLAKNYIINLTHIILSKRNEEA 220
            ||..|.|||.|||.||:|...||.|||  |....|:||||.||.||||      |||:     :|
 Worm    16 RLSINLRERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKN------HIIM-----QA 69

  Fly   221 AALELNSGAVGGVLLSNLSS-ESGG 244
            .|:|..|     ||:|.|.: :|.|
 Worm    70 KAIEELS-----VLVSQLKTRKSSG 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_001260674.1 HLH 154..208 CDD:238036 29/51 (57%)
hlh-32NP_001023430.1 bHLH_TS_bHLHe22_like 16..77 CDD:381474 36/76 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.