DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Olig2

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001094027.1 Gene:Olig2 / 304103 RGDID:1307098 Length:323 Species:Rattus norvegicus


Alignment Length:272 Identity:84/272 - (30%)
Similarity:119/272 - (43%) Gaps:54/272 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSSESAEGSSRPVRRATRRTSQLSNNTYDLEMTDSSSQSDD-----TSGGGGSSNGGGSTTNTGH 96
            :.|:::..||||                      ||.:.||     .|.||.||...|.|.::..
  Rat     1 MDSDASLVSSRP----------------------SSPEPDDLFLPARSKGGSSSGFTGGTVSSST 43

  Fly    97 PSGCS-------LGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNANGNASRRRKGALNAKER 154
            ||.|.       .|..|.:|.....:...|...|  :.:||||::|:|..:::::.|..:...|.
  Rat    44 PSDCPPELSSELRGAMGTAGAHPGDKLGGGGFKS--SSSSTSSSTSSAATSSTKKDKKQMTEPEL 106

  Fly   155 NMRRLESNERERMRMHSLNDAFQSLREVIP--HVEMERRLSKIETLTLAKNYIINLTHIILSKRN 217
            ...||:.|.|||.|||.||.|...||||:|  |....|:||||.||.||:|||:.||:.:     
  Rat   107 QQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSL----- 166

  Fly   218 EEAAAL--ELNSG--------AVGGVLLSN-LSSESGGPVASGIPANSNAATICFEDTLASGGAF 271
            ||...|  |:..|        |.||:..|. |.:.:..|.|:...|:..|.........|:..|.
  Rat   167 EEMKRLVSEIYGGHHAGFHPSACGGLAHSTPLPTATAHPAAAAHAAHHPAVHHPILPPAAAAAAA 231

  Fly   272 DCAILAATDGSL 283
            ..|..|.:..||
  Rat   232 AAAAAAVSSASL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 32/60 (53%)
Olig2NP_001094027.1 bHLH_TS_OLIG2 95..179 CDD:381510 38/88 (43%)

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