DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and neurog1

DIOPT Version :9

Sequence 1:NP_001260674.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_571116.1 Gene:neurog1 / 30239 ZFINID:ZDB-GENE-990415-174 Length:208 Species:Danio rerio


Alignment Length:169 Identity:54/169 - (31%)
Similarity:86/169 - (50%) Gaps:27/169 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 STIAPNSTSSN-----SSNANGNASRRRKG------ALNAKERNMRRLESNERERMRMHSLNDAF 176
            |::.|.|.:|:     :|.|.....:||:|      .::..::| |||::|:|||.|||:||||.
Zfish    27 SSLHPASPASSCGKPPASPAGLQQKKRRRGRARNETTVHVVKKN-RRLKANDRERNRMHNLNDAL 90

  Fly   177 QSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILSKRNEEAAALELNSGAVGGVLLSNLSSE 241
            .:||.|:|....:.:|:|||||..|.|||..|:..|.....::..:.:      |.:||..||..
Zfish    91 DALRSVLPAFPDDTKLTKIETLRFAHNYIWALSETIRIADQKQGKSRD------GPLLLPGLSCM 149

  Fly   242 SGGPV--------ASGIPANSNAATICFEDTLASGGAFD 272
            :..|.        .||..::|::.:.|..|. .|..|.|
Zfish   150 ADAPSPGSDSCSWPSGASSSSSSPSYCNSDP-GSPAAMD 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_001260674.1 HLH 154..208 CDD:238036 29/53 (55%)
neurog1NP_571116.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 9/34 (26%)
CCDC106 <20..>102 CDD:292422 28/75 (37%)
HLH 68..127 CDD:238036 30/59 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..180 4/20 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19290
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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