DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dimm and twist1a

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_571059.1 Gene:twist1a / 30175 ZFINID:ZDB-GENE-000210-6 Length:171 Species:Danio rerio


Alignment Length:145 Identity:42/145 - (28%)
Similarity:67/145 - (46%) Gaps:20/145 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DSSSQSDDTSGGGGSSNGGGSTTNTGHPSGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSNS 134
            ||||........|.|..              .|..:.|....|.::||......:.:|.....:.
Zfish    10 DSSSPESPVDSLGNSEE--------------ELDRRQPKRVSRKKRASRKNAEDSDSPTPGKRSK 60

  Fly   135 SNANGNASRRRKGALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLT 199
            ..:|.::|.:     :.::...:|:.:|.|||.|..|||:||.|||::||.:..: :||||:||.
Zfish    61 KCSNSSSSPQ-----SLEDLQTQRVMANVRERQRTQSLNEAFASLRKIIPTLPSD-KLSKIQTLK 119

  Fly   200 LAKNYIINLTHIILS 214
            ||..||..|..::.|
Zfish   120 LAARYIDFLCQVLQS 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 28/58 (48%)
twist1aNP_571059.1 bHLH_SF 73..143 CDD:469605 28/63 (44%)

Return to query results.
Submit another query.