DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Scx

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_006520723.1 Gene:Scx / 20289 MGIID:102934 Length:232 Species:Mus musculus


Alignment Length:180 Identity:54/180 - (30%)
Similarity:71/180 - (39%) Gaps:52/180 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SQSDDTSGGGGSSNGGGSTTNTGHPSGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNA 137
            |:.:|.   |..|:|........|.:.|.|.|......|| :.|.||..|               
Mouse    24 SEDEDR---GSESSGSDEKPCRVHAARCGLQGARRRAGGR-RAAGSGPGP--------------- 69

  Fly   138 NGNASRRRKGALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAK 202
            .|...|..:          :|..:|.|||.|.:|:|.||.:||.:||....:|:|||||||.||.
Mouse    70 GGRPGREPR----------QRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLAS 124

  Fly   203 NYIINLTHIILSKRNEEAAALELNSGAVGGVLLSNLSSESGGPVASGIPA 252
            :||.:|                      |.|||...:...|.|..|| ||
Mouse   125 SYISHL----------------------GNVLLVGEACGDGQPCHSG-PA 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 27/58 (47%)
ScxXP_006520723.1 bHLH_TS_scleraxis 76..143 CDD:381521 31/98 (32%)

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