DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and Ptf1a

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_061279.2 Gene:Ptf1a / 19213 MGIID:1328312 Length:324 Species:Mus musculus


Alignment Length:163 Identity:55/163 - (33%)
Similarity:73/163 - (44%) Gaps:31/163 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 SSGACPSTIAPNSTSSNSSNA-----NG----NASRRRKGALNAKERNMRRLESNERERMRMHSL 172
            |.|:.||.:|....:..|..|     ||    .|:|||:...:..|....|..:|.|||.||.|:
Mouse   112 SPGSPPSCLAYPCAAVLSPGARLGGLNGAAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSI 176

  Fly   173 NDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILSKRNEEAAALELNSGAVGGVLLSN 237
            ||||:.||..||.:..|:||||::||.||..||..|:.::       .|.|.|.....||     
Mouse   177 NDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV-------QADLPLRGSGAGG----- 229

  Fly   238 LSSESGGP-----VASGIPAN-SNAATICFEDT 264
                .|||     :....|.| :....||...|
Mouse   230 ----CGGPGGSRHLGEDSPGNQAQKVIICHRGT 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 28/58 (48%)
Ptf1aNP_061279.2 bHLH_TS_PTF1A 162..216 CDD:381423 28/53 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..324
Blue background indicates that the domain is not in the aligned region.

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