DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and hlh-4

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001379052.1 Gene:hlh-4 / 176372 WormBaseID:WBGene00001951 Length:205 Species:Caenorhabditis elegans


Alignment Length:160 Identity:39/160 - (24%)
Similarity:70/160 - (43%) Gaps:28/160 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 NERERMRMHSLNDAFQSLREVIPHV-EMERRLSKIETLTLAKNYIINLTHIILSKRNEEAAALEL 225
            |.|||.|:|::|.||..|::.:|.: :..:|:||:..|..|..||..|..:|   ::.||....:
 Worm     9 NARERTRVHTVNQAFLVLKQHLPSLRQFTKRVSKLRILNAAITYIDTLLKLI---QSSEAVPQSV 70

  Fly   226 NSGAVGGVLLS------------NLSSESGGPVASGIPANSNAATICFEDTLASGGAFDCAILAA 278
            .|..:|.::.:            .:.|:...|:|..:|.:        |..|.:..|..|    |
 Worm    71 ISATLGPIVPTPVRAVHKISKPDTVISQPIRPLAPVLPRH--------ETYLPAPIAATC----A 123

  Fly   279 TDGSLLNAATVTTSPAMQSIQSQAIHLQTP 308
            .|.||::..:...|.....:..|...:.:|
 Worm   124 PDHSLVDYRSTFASSLAPPVPMQMPSVFSP 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 20/54 (37%)
hlh-4NP_001379052.1 bHLH_TS_ASCL 5..60 CDD:381424 19/50 (38%)

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