DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and HLH54F

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_308637.5 Gene:HLH54F / 1269982 VectorBaseID:AGAMI1_011263 Length:310 Species:Anopheles gambiae


Alignment Length:300 Identity:73/300 - (24%)
Similarity:108/300 - (36%) Gaps:97/300 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 MRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILSKRNEE- 219
            ::|..:|.|||.||..|:.||.:|:..||.|..:.:|||::||.||||||..|...:..:..|: 
Mosquito    34 IQRNAANARERARMRVLSKAFFNLKRNIPWVPADTKLSKLDTLRLAKNYITYLAATLDGQSVEDF 98

  Fly   220 ------------------------------------AAALELNSGAVGGVLLSNLSSE------- 241
                                                |||.......||....:.::::       
Mosquito    99 STNLAQPPKTAWPFIFQQVQPHETSKSSKHGTQSTTAAAFTATPPNVGQSTCATMAADRQPGKWV 163

  Fly   242 ---------SGG-PVASGIPANSNAATICFEDTLASGGAFD------------CAILAATD---- 280
                     ||| .|:.||.:.:.|.:..  ...||.|.|.            ..::..||    
Mosquito   164 DYHHPKDVTSGGVAVSEGIKSQTIAPSPL--SVAASLGGFSENRISSTVPGLGDGVVGVTDYGGF 226

  Fly   281 ----GSLLNAATVTTSPAMQSIQSQAIHLQTPMEQQQQQASHLPHHQQAMHGHGHLGASIQSQQQ 341
                |.:.|:||:...|     |.:..|.....:|||.......||.| :|.|||      .|.|
Mosquito   227 GEAMGMVGNSATLHHQP-----QQEPHHNHRQQQQQQHSVGQQEHHHQ-LHHHGH------QQYQ 279

  Fly   342 PSLVLNGTTSVGLGIGIGVGVGVGVGVCNNAPSFADINDN 381
                    |:.|.|..:|..||:. |...:....|.|..:
Mosquito   280 --------TAGGSGCHVGGSVGMS-GAYQHRQHMASIGSD 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 26/58 (45%)
HLH54FXP_308637.5 None

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