DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and neurod2

DIOPT Version :9

Sequence 1:NP_001260674.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_571157.1 Gene:neurod2 / 114435 ZFINID:ZDB-GENE-010608-3 Length:363 Species:Danio rerio


Alignment Length:363 Identity:89/363 - (24%)
Similarity:128/363 - (35%) Gaps:92/363 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GGGSSNGGG--STTNTGHPSGCSLG------GQGPSGRGRVQQASSGACPSTIAPNSTSSNSSNA 137
            ||...:.|.  |.|.......|.||      |....|..|.|...:|   ..........:....
Zfish    19 GGWVDDSGSEDSKTKDEEQERCRLGDEDLDEGSVKGGGSRAQSEIAG---EEDYDEDVDEDDCGE 80

  Fly   138 NGNASRRRKGALNAKERNM----------RRLESNERERMRMHSLNDAFQSLREVIPHVEMERRL 192
            .|:..|.:|  ...|:|.|          ||.::|.|||.|||.||.|..:|.:|:|.....::|
Zfish    81 EGDGDRPKK--RGPKKRKMTPARLERSKVRRQKANARERTRMHDLNSALDNLLKVVPCYSKTQKL 143

  Fly   193 SKIETLTLAKNYIINLTHIILS-KRNEEAAALELNSGAVGGVLLSNLSSESGGPVASGIPANS-N 255
            ||||||.||||||..|:.|:.: ||.:..:.::        .|...||..:...||..:..|| |
Zfish   144 SKIETLRLAKNYIWALSEILRNGKRPDVVSYVQ--------TLCKGLSQPTTNLVAGCLQLNSRN 200

  Fly   256 AATICFEDTLASGGAFDCAILAATDGSLLNAATVTTSPAMQSIQSQAIHLQTPMEQQQQQASHLP 320
            ..|    :....|..|.               |.|.|.::||...|...|.:...|.......|.
Zfish   201 FLT----EQCQEGVRFH---------------TPTPSFSIQSYPYQCSRLSSTNCQSGSSTHSLR 246

  Fly   321 HHQ-----QAMHGHG----HLGASIQSQQQPSLVLNGT--------------------------- 349
            :|.     :|::..|    ::.|..:....|.:.:||.                           
Zfish   247 NHSLCSAYEALYTEGTSPEYISADFEGHHGPPVCVNGNFGVRQEEPLSPDAERGYQYSMHYTNLH 311

  Fly   350 ---TSVGLGIGIG-VGVGVGVGVCNNAPSFADINDNFD 383
               :|...||..| .|...|.....|.|.|.|::.:.|
Zfish   312 GSRSSAAHGITCGPPGARSGSVHSENLPLFHDVHMHHD 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_001260674.1 HLH 154..208 CDD:238036 30/63 (48%)
neurod2NP_571157.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..116 22/101 (22%)
Nuclear localization signal. /evidence=ECO:0000255 93..99 3/5 (60%)
HLH 105..164 CDD:238036 30/58 (52%)
Neuro_bHLH 166..285 CDD:289310 29/145 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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