DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and neurog3

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_571890.1 Gene:neurog3 / 114411 ZFINID:ZDB-GENE-010608-4 Length:208 Species:Danio rerio


Alignment Length:165 Identity:46/165 - (27%)
Similarity:74/165 - (44%) Gaps:36/165 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SGCSLGGQGPSGRGRVQQASSGACPSTIAPNS------------------TSSNSSNANGNASRR 144
            |.|:|.|:..:.:.....||.....||....|                  |......:||   :.
Zfish     5 SSCALVGRNGTFKSNWSSASEPKFGSTDMTKSQPIKYNREAELASKEWSFTFREDKTSNG---KL 66

  Fly   145 RKGALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLT 209
            :|....:::|..||:::|:|.|.|||:||.|..:||.|:|....:.:|:|||||..|:|||..|:
Zfish    67 KKLMSTSRQRGNRRVKANDRGRHRMHNLNSALDNLRSVLPTFPDDAKLTKIETLRFARNYIWALS 131

  Fly   210 HII-----LSKRNEEA----------AALELNSGA 229
            ..:     :.:|:..|          |.|::..||
Zfish   132 ETLRIADHVRQRSNHAQDQENLAVPNACLDVRYGA 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 26/63 (41%)
neurog3NP_571890.1 bHLH_TS_NGN3_ATOH5 72..139 CDD:381561 27/66 (41%)

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