DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dimm and si:ch211-196c10.13

DIOPT Version :9

Sequence 1:NP_001260674.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_002663164.1 Gene:si:ch211-196c10.13 / 100334878 ZFINID:ZDB-GENE-130603-71 Length:175 Species:Danio rerio


Alignment Length:129 Identity:41/129 - (31%)
Similarity:55/129 - (42%) Gaps:38/129 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 GCSLGGQGPSGRGRVQQASSGACPSTIAPNSTSSN-------------------SSNANGNASRR 144
            ||:..|:|.              |:....|.|:|:                   .|..:||:.  
Zfish    32 GCARLGEGD--------------PAHPFDNFTTSHQIIDVTTSAETDRKSFQGLESGCHGNSV-- 80

  Fly   145 RKGALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEME--RRLSKIETLTLAKNYII 206
             ..:...||....||..|.|||.|||.||:|...||.|||:....  ::||||.||.||||:|:
Zfish    81 -SSSRTVKEPGALRLLINARERRRMHDLNEALDDLRAVIPYTSNRKVKKLSKIATLLLAKNHIL 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_001260674.1 HLH 154..208 CDD:238036 28/55 (51%)
si:ch211-196c10.13XP_002663164.1 HLH 97..151 CDD:197674 26/47 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.