DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and neurog1

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001116895.1 Gene:neurog1 / 100144651 XenbaseID:XB-GENE-491452 Length:227 Species:Xenopus tropicalis


Alignment Length:229 Identity:59/229 - (25%)
Similarity:101/229 - (44%) Gaps:47/229 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 VQQASSGACPSTIAPNSTSSNSSNANGNASRRRKGALNAKERN---------MRRLESNERERMR 168
            :|.||..:.....:|..|.........    :||..:.::.:|         .||:::|:|||.|
 Frog    27 MQSASPFSSEHMSSPAQTPEKCQEEKD----KRKKRVRSRVKNDAVLHTIKKTRRVKANDRERNR 87

  Fly   169 MHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHII-LSKRNEEAAALELNSGAVGG 232
            ||:||.|...||.::|....:.:|:|||||.||.|||..|:..: |:.:::|.....|...|   
 Frog    88 MHNLNSALDELRGILPSFPDDTKLTKIETLRLAHNYIWALSETLRLADQSKEKPLKNLGHPA--- 149

  Fly   233 VLLSNLSSESGGP-----VASGIPANSNAA----TICFEDTLASGGAFDCAILAATDGSLLNAAT 288
             .||..:..|.|.     ::|..|::|:::    ::|.....:...:.|| ....|| ||.    
 Frog   150 -YLSPATPPSPGSDAESWMSSSSPSSSSSSSSSFSVCTSSPSSPAMSEDC-YYGHTD-SLF---- 207

  Fly   289 VTTSPAMQSIQSQAIHLQTPMEQQQQQASHLPHH 322
                 ::.::|...|         |..:|.|.:|
 Frog   208 -----SLHTLQQNMI---------QHASSFLQYH 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 28/59 (47%)
neurog1NP_001116895.1 bHLH_TS_NGN1_NeuroD3 60..136 CDD:381559 29/75 (39%)

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