DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and neurog3

DIOPT Version :10

Sequence 1:NP_523611.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_002935814.2 Gene:neurog3 / 100038294 XenbaseID:XB-GENE-876279 Length:226 Species:Xenopus tropicalis


Alignment Length:163 Identity:49/163 - (30%)
Similarity:77/163 - (47%) Gaps:37/163 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SNANGNASRRRK----------GALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEME 189
            |:..||..:::|          .....|:|..||:::|:|||.|||:||.|..:||.|:|....:
 Frog    55 SHPRGNERKKQKVKRMRSKVKSNTTVIKQRRNRRVKANDRERNRMHNLNSALDALRSVLPTFPDD 119

  Fly   190 RRLSKIETLTLAKNYIINLTHI-------ILSKRNEEAAALELNSGAVGGVLLSNLSSESGGPVA 247
            .:|:|||||..|.|||..|:..       :||.  |:...|:.........|:.:|||       
 Frog   120 AKLTKIETLRFAHNYIWALSETLRMADQSLLSP--EQQHLLDSLKKLPKSCLMMDLSS------- 175

  Fly   248 SGIPANSNAAT-------ICFED-TLASGGAFD 272
               |.:|.::|       ..|:| :|:..|:.|
 Frog   176 ---PTSSTSSTEWDSLYSPLFQDSSLSPTGSMD 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_523611.1 bHLH_TS_dimmed_like 157..216 CDD:381555 29/65 (45%)
neurog3XP_002935814.2 bHLH_TS_NGN3_ATOH5 80..147 CDD:381561 29/66 (44%)

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