DRSC/TRiP Functional Genomics Resources

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Protein Alignment dimm and scxa

DIOPT Version :9

Sequence 1:NP_001260674.1 Gene:dimm / 35404 FlyBaseID:FBgn0023091 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001076538.2 Gene:scxa / 100034489 ZFINID:ZDB-GENE-060503-414 Length:204 Species:Danio rerio


Alignment Length:189 Identity:59/189 - (31%)
Similarity:78/189 - (41%) Gaps:46/189 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TDSSSQSDDTSGGGGSSNGGGSTTNTGH--PSGCSLGGQGPSGRGRVQQASSGACPSTIAPNSTS 131
            :|.|..|:|...|..||   ||...:.|  .||..|      ..||.:::|.|.....|....|.
Zfish    17 SDISMMSEDDENGSESS---GSDDRSFHLDTSGYDL------KVGRKRKSSVGGGGRLIGVTPTI 72

  Fly   132 SNSSNANGNASRRRKGALNAKERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIE 196
            ...:..:....|:|..|             |.|||.|.:|:|.||.:||.:||....:|:|||||
Zfish    73 PTGTIGHVPEIRQRNAA-------------NARERDRTNSVNTAFTALRTLIPTEPADRKLSKIE 124

  Fly   197 TLTLAKNYIINLTHIILSKRNEEAAALELNSGAVGGVLLSNLSSESGGPVASGIPANSN 255
            ||.||.:||.:|                      |.|||...:...|.|..||.|:.||
Zfish   125 TLRLASSYISHL----------------------GNVLLVGEACGDGQPCHSGGPSTSN 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dimmNP_001260674.1 HLH 154..208 CDD:238036 25/53 (47%)
scxaNP_001076538.2 HLH 85..136 CDD:278439 27/63 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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