DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8671 and sym-3

DIOPT Version :9

Sequence 1:NP_001286124.1 Gene:CG8671 / 35400 FlyBaseID:FBgn0032938 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001024500.1 Gene:sym-3 / 183819 WormBaseID:WBGene00006368 Length:305 Species:Caenorhabditis elegans


Alignment Length:300 Identity:109/300 - (36%)
Similarity:160/300 - (53%) Gaps:32/300 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MAFMMKKKKYKFNVEVQLQDLVEVALVNEVLFAKIRLLDGGSFQEYSSREEVRNHRVEWNRSFEF 75
            ||| :|:|..||:|::|:..|.:|.|||..:|.|:||||||||:|.:.|.||:||...:|..|.|
 Worm     1 MAF-IKRKTVKFSVDLQVCQLSDVPLVNATVFGKMRLLDGGSFEEATERVEVKNHSASFNTRFVF 64

  Fly    76 PCKMSANASTGVLDPCHLRISIRKEMKGGRSYYKLGFIDLNLAEFAGAGL--TSRRFLLEGYDSR 138
            .|::..:.::|.|:.|..|:|||||.|||:|||||||:|:||:|:|.:|:  .||.:||.||.|.
 Worm    65 CCRIPCDQTSGTLEKCLCRVSIRKEQKGGKSYYKLGFVDINLSEYAASGVEGISRTYLLNGYTSN 129

  Fly   139 HRLDNSMLRVSIKMHMLSGDILFKAPTPNLKSKQSKPSI-------DDFSNAATGVGL--QIPTA 194
            .|||||.:.:.:.|...|.|..|:.|..:....:...:|       ||.:::..|...  ::...
 Worm   130 QRLDNSKVCIKVAMTHQSADPFFRVPRLSTFGPRQDGAIDQDGFRADDETDSEEGTSSHPKLSNV 194

  Fly   195 TALPSIGGGSGGASVSLGGSGVTLGGI------PGNQSLPGTRPVSTTKEE----DIDNQALIAA 249
            ..|.|    |..||.|.....|....:      |..|....::..|..|.:    |.||  :|..
 Worm   195 DVLES----SSAASNSQVDEPVVERRVIHPPQHPTCQLRRFSQDRSAQKIQHSRFDADN--VIDK 253

  Fly   250 IVTDSGLSE---SSESGVTLTTDNLQQHGSVVVANPISPV 286
            |:.:..:||   .|.||..:....|.:||..:| ||..||
 Worm   254 IIAECRISEDEVESNSGGLVLEKFLDKHGKPLV-NPRQPV 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8671NP_001286124.1 NT-C2 22..161 CDD:287345 68/140 (49%)
sym-3NP_001024500.1 NT-C2 5..152 CDD:371003 71/146 (49%)
crotonase-like 224..>275 CDD:390041 14/52 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166638
Domainoid 1 1.000 146 1.000 Domainoid score I2819
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D318637at33208
OrthoFinder 1 1.000 - - FOG0002357
OrthoInspector 1 1.000 - - oto19136
orthoMCL 1 0.900 - - OOG6_106774
Panther 1 1.100 - - LDO PTHR21456
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3220
SonicParanoid 1 1.000 - - X1553
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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