DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8671 and sym-3

DIOPT Version :10

Sequence 1:NP_724324.2 Gene:CG8671 / 35400 FlyBaseID:FBgn0032938 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001024500.1 Gene:sym-3 / 183819 WormBaseID:WBGene00006368 Length:305 Species:Caenorhabditis elegans


Alignment Length:300 Identity:109/300 - (36%)
Similarity:160/300 - (53%) Gaps:32/300 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MAFMMKKKKYKFNVEVQLQDLVEVALVNEVLFAKIRLLDGGSFQEYSSREEVRNHRVEWNRSFEF 75
            ||| :|:|..||:|::|:..|.:|.|||..:|.|:||||||||:|.:.|.||:||...:|..|.|
 Worm     1 MAF-IKRKTVKFSVDLQVCQLSDVPLVNATVFGKMRLLDGGSFEEATERVEVKNHSASFNTRFVF 64

  Fly    76 PCKMSANASTGVLDPCHLRISIRKEMKGGRSYYKLGFIDLNLAEFAGAGL--TSRRFLLEGYDSR 138
            .|::..:.::|.|:.|..|:|||||.|||:|||||||:|:||:|:|.:|:  .||.:||.||.|.
 Worm    65 CCRIPCDQTSGTLEKCLCRVSIRKEQKGGKSYYKLGFVDINLSEYAASGVEGISRTYLLNGYTSN 129

  Fly   139 HRLDNSMLRVSIKMHMLSGDILFKAPTPNLKSKQSKPSI-------DDFSNAATGVGL--QIPTA 194
            .|||||.:.:.:.|...|.|..|:.|..:....:...:|       ||.:::..|...  ::...
 Worm   130 QRLDNSKVCIKVAMTHQSADPFFRVPRLSTFGPRQDGAIDQDGFRADDETDSEEGTSSHPKLSNV 194

  Fly   195 TALPSIGGGSGGASVSLGGSGVTLGGI------PGNQSLPGTRPVSTTKEE----DIDNQALIAA 249
            ..|.|    |..||.|.....|....:      |..|....::..|..|.:    |.||  :|..
 Worm   195 DVLES----SSAASNSQVDEPVVERRVIHPPQHPTCQLRRFSQDRSAQKIQHSRFDADN--VIDK 253

  Fly   250 IVTDSGLSE---SSESGVTLTTDNLQQHGSVVVANPISPV 286
            |:.:..:||   .|.||..:....|.:||..:| ||..||
 Worm   254 IIAECRISEDEVESNSGGLVLEKFLDKHGKPLV-NPRQPV 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8671NP_724324.2 NT-C2 22..161 CDD:463058 68/140 (49%)
sym-3NP_001024500.1 NT-C2 5..152 CDD:463058 71/146 (49%)
crotonase-like 224..>275 CDD:474030 14/52 (27%)

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