DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k14505 and Atpaf2

DIOPT Version :9

Sequence 1:NP_001260668.1 Gene:l(2)k14505 / 35399 FlyBaseID:FBgn0021856 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001100476.1 Gene:Atpaf2 / 303190 RGDID:1305161 Length:298 Species:Rattus norvegicus


Alignment Length:259 Identity:117/259 - (45%)
Similarity:166/259 - (64%) Gaps:4/259 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GAASSFTVRHYASPP--KRFYKKTSVLSGDSGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEF 85
            |.|.....|.|..|.  ||||:..|:..|:.|:|:.|||||||||:...|.|.||.||||||||:
  Rat    39 GPALRPPARAYVPPTERKRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEW 103

  Fly    86 DAQKENIERSRMHLSALCFTAIDNPNHLSKLDMVNYLLNFIATDTVLFQYDDEKDLQDLQVNEWD 150
            |:|::.|:...|||:.||.|::|||...:|..::...:.|:.|||:.::.::.:.|.:||.||||
  Rat   104 DSQQDTIKFYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQKNEWD 168

  Fly   151 PVIAWFNQRYDTNLQKTMNITPPQVSEQDKMNVAKHFQSYSLETLHGFIFAVDTLKSIVLACAVI 215
            |:|.|..:||...:..:.:|..|.:..|.:..:..|..||::..|.|..|.|..|||::|...:|
  Rat   169 PIIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLASYNMWALQGIEFVVAQLKSMLLTLGLI 233

  Fly   216 EQMLTVEKAVALARLEEEYQLKFWGRVEWAHDLSQQELQARLAAAVLFVHLNCSE-NLVKQKII 278
            :..||||:||.|:|||||||::.||.:|||||...|||:||.||..||||| ||| :.||.|::
  Rat   234 DLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL-CSESSTVKHKLL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k14505NP_001260668.1 ATP12 39..159 CDD:284873 55/119 (46%)
Atpaf2NP_001100476.1 ATP12 57..177 CDD:284873 55/119 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347649
Domainoid 1 1.000 125 1.000 Domainoid score I5366
eggNOG 1 0.900 - - E1_COG5387
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H34602
Inparanoid 1 1.050 228 1.000 Inparanoid score I3390
OMA 1 1.010 - - QHG63179
OrthoDB 1 1.010 - - D468631at33208
OrthoFinder 1 1.000 - - FOG0004839
OrthoInspector 1 1.000 - - oto98790
orthoMCL 1 0.900 - - OOG6_102681
Panther 1 1.100 - - LDO PTHR21013
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5183
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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