Protein Alignment Hr39 and nr5a1a

DIOPT Version :9

• Sequence 1: NP_476932.1
• Gene: Hr39 / 35398
• FlyBaseID: FBgn0261239
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: NP_571869.1
• Gene: nr5a1a / 83916
• ZFINID: ZDB-GENE-010504-1
• Length: 454
• Species: Danio rerio
• Alignment Length: 475
• Identity: 152/475 - (32%)
• Similarity: 222/475 - (46%)
• Gaps: 81/475 - (17%)

  Fly   376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKG 440
            ||:||||:||:|||:.:||||||||||||||.|.|.|.:...|.:..:.||:||.|||:|||..|
Zfish    13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTQNQDCGIDKTQRKRCPFCRFQKCLSVG 77

  Fly   441 MKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFGG 505
            |:|||:|.||.||||:.:           .|:...|:|.           :|..:.|.:.:||
Zfish    78 MRLEAVRADRMRGGRNKF-----------GPMYKRDRAL-----------KQQKRALIRASGF-- 118

  Fly   506 VPIPCSTSLPASPSLAGTSVKSE-EMAETGKQSLRTGSVPPL---LQEIMDVEHLWQYTDAEL-- 564
                   .|.|:    ||.:..: |.:..|.||......|.|   ||........:|||...|
Zfish   119 -------KLEAN----GTLLSGQTEFSSVGLQSPYDCPPPALGVALQNYGSFPAQYQYTAPSLPK 172

  Fly   565 -ARINQPLSAFASGSSSS---SSSSG-TSSGAHAQLTNPLLASAGL------------------- 605
             .:...| .|:.|...|:   |.:.| .|:..|:...||.|....|
Zfish   173 SIKAEYP-DAYPSSPDSTLGYSYADGCLSASPHSVPINPALPPLVLELQSCDPDEEQVRGKICAY 236

  Fly   606 -----SSNG--ENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLF 663
                 |..|  |.:.|..:  ||.:||..|:.||:|.:|...||.:.:.||:.||.|.|.||||.
Zfish   237 LHQEQSGRGKLEKSRPSSL--LCVMADQTLFSIVEWARSCVFFKELKVGDQMRLLHNCWSELLLL 299

  Fly   664 SCCFRSI--DTPGEIKMSQGRKITLSQAKSNG--LQTCIERMLNLTDHLRRLRVDRYEYVAMKVI 724
            ....|.:  ...|.:.:..|:::.||.....|  |.:.:||..:|:..|:.|:||..|...:|.:
Zfish   300 DHICRQVHHGRDGSLLLITGQEVELSAVLDAGPPLSSMVERGQDLSRRLQLLQVDSREMACLKFL 364

  Fly   725 VLLQSDTTELQEAVKVRECQEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTI 789
            :|...:...|:....|...||:...:|..|||..||....:|.:|:||:|:|:......::.|..
Zfish   365 ILFNPNVKLLENPQFVESVQEQVNGALLEYTLFSYPQCVERFSQLILRLPELRSLSAEAEDFLCY 429

  Fly   790 KTRDG--ADFNLLMELLRGE 807
            |...|  ...|||:|:|..:
Zfish   430 KHLCGEVPCNNLLIEMLHAK 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr39	NP_476932.1	NR_DBD_Lrh-1_like	376..468	CDD:143541	51/91 (56%)
		NR_LBD_F2	617..779	CDD:132728	54/165 (33%)
nr5a1a	NP_571869.1	NR_DBD_Lrh-1_like	13..105	CDD:143541	53/102 (52%)
		NR_LBD_Ftz-F1_like	212..449	CDD:132742	68/238 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170592408
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D278717at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm24680
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24086
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.950