DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr39 and Nr4a3

DIOPT Version :9

Sequence 1:NP_476932.1 Gene:Hr39 / 35398 FlyBaseID:FBgn0261239 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_113816.1 Gene:Nr4a3 / 58853 RGDID:61882 Length:628 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr39NP_476932.1 NR_DBD_Lrh-1_like 376..468 CDD:143541
NR_LBD_F2 617..779 CDD:132728
Nr4a3NP_113816.1 Interaction with NCOA1, NCOA2, NCOA3 and KAT2B. /evidence=ECO:0000250|UniProtKB:Q9QZB6 1..293
Required for DNA-PK heterotrimer. /evidence=ECO:0000250|UniProtKB:Q92570 1..140
Activation function (AF)-1 domain. /evidence=ECO:0000250|UniProtKB:Q9QZB6 1..112
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..163
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..290
NR_DBD_NGFI-B 292..366 CDD:143527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 366..396
Interaction with KAT2B. /evidence=ECO:0000250|UniProtKB:Q9QZB6 381..628
NR_LBD 398..628 CDD:416257
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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