DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr39 and NR6A1

DIOPT Version :10

Sequence 1:NP_476932.1 Gene:Hr39 / 35398 FlyBaseID:FBgn0261239 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_201591.2 Gene:NR6A1 / 2649 HGNCID:7985 Length:480 Species:Homo sapiens


Alignment Length:416 Identity:129/416 - (31%)
Similarity:189/416 - (45%) Gaps:41/416 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKG 440
            |.||||:.:|.||||.|||.|||||||::.|::.|.|.|...|.:|...|.:|..||..||||.|
Human    60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMG 124

  Fly   441 MKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFGG 505
            |..:|||||...|||          |..:.|:...::......:.....::..|...|..:....
Human   125 MNRKAIREDGMPGGR----------NKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSS 179

  Fly   506 VPIPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTG----SVPPLLQEIMDVEHLWQYTDAELAR 566
            .....|.|...||....:|.:|.|:  .|..:.|..    ||||..|.|   .||:.|:.     
Human   180 PGNRASESNQPSPGSTLSSSRSVEL--NGFMAFREQYMGMSVPPHYQYI---PHLFSYSG----- 234

  Fly   567 INQPLSAFASGSSSSSSSSGTSSGAHAQ----LTNPLLASAGLSSNGENANPDLIAHLCNVADHR 627
             :.||....:.|....|.|.......|:    |..|:|...|.:.    ...:|.|.||.:||..
Human   235 -HSPLLPQQARSLDPQSYSLIHQLLSAEDLEPLGTPMLIEDGYAV----TQAELFALLCRLADEL 294

  Fly   628 LYKIVKWCKSLPLFKNISIDDQICLLINSWCEL-LLFSCCFRSIDTPGEI-----KMSQGRKITL 686
            |::.:.|.|.||.|..:||.|..|||.::|.|| ||.|....|....||:     |.|...: .|
Human   295 LFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDE-EL 358

  Fly   687 SQAKSNGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQSL 751
            .:....|::. |||::.|.....:|:|...||..||.|..|..|...|..|.::.:..::.....
Human   359 HRFSDEGMEV-IERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQLEQLNKRYWYIC 422

  Fly   752 QAYTLAHYPDTPSKFGELLLRIPDLQ 777
            |.:|...|...|::|.:|::.:|:::
Human   423 QDFTEYKYTHQPNRFPDLMMCLPEIR 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr39NP_476932.1 NR_DBD_Lrh-1_like 376..468 CDD:143541 45/91 (49%)
NR_LBD_F2 617..779 CDD:132728 52/167 (31%)
NR6A1NP_201591.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
NR_DBD_GCNF_like 52..141 CDD:143543 44/90 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 131..150 8/28 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..199 6/36 (17%)
Sufficient for interaction with UIMC1. /evidence=ECO:0000250|UniProtKB:Q64249 172..253 23/91 (25%)
NR_LBD_DHR4_like 256..467 CDD:132751 58/199 (29%)
Blue background indicates that the domain is not in the aligned region.

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