Protein Alignment Hr39 and nhr-226

DIOPT Version :9

• Sequence 1: NP_476932.1
• Gene: Hr39 / 35398
• FlyBaseID: FBgn0261239
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: NP_503630.1
• Gene: nhr-226 / 188975
• WormBaseID: WBGene00020850
• Length: 387
• Species: Caenorhabditis elegans
• Alignment Length: 471
• Identity: 84/471 - (17%)
• Similarity: 157/471 - (33%)
• Gaps: 153/471 - (32%)

  Fly   376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNR----------KNYVCVRGGPCQVSISTRKKCPA 430
            |.|||....|.|:|:.:|.:|..||:|:.:::          :..:|.              |..
 Worm     8 CRICGKNAHGTHFGVITCRACGVFFRRSFKSKWIFKKCKKEDEGKICT--------------CKP 58

  Fly   431 CRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQ 495
            ||.:||::.||..:..:.||               :::|:..|:|
 Worm    59 CRLQKCVEMGMSSKNFQYDR---------------DAILAKHLTP-------------------- 88

  Fly   496 RLHQLNGFGGVP---IPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTGSVPPLLQEIMDVEHLW 557
               .::.|.|.|   :.|..|..|...|    :..:.:.....:.||.|           ||.:
 Worm    89 ---SISYFVGRPEFLLFCDPSHSAPKIL----INLDGLVSEASRLLRNG-----------VESV- 134

  Fly   558 QYTDAELARINQPLSAFASGSSSSSSSSGTSSGAHAQLTNPLLASAGLSSNGENANPDLIAHLCN 622
            .:.:.:|.::...|....:...|                        |....:...|:.:    :
 Worm   135 VFAETQLKKLALGLKVMQADMRS------------------------LKYFEKIGKPEFL----D 171

  Fly   623 VADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLS 687
            :.::....::||......|:.:..:.|:.|:.:.|..|:.|..|..::         ..||  .|
 Worm   172 IIEYYFTTVIKWISHFDEFRKLDQNIQMKLVQSIWHILMKFHKCSATV---------AYRK--SS 225

  Fly   688 QAKSNGLQ-----TCIERMLNLTD----------HLRRLRVDRYEYVAMKVIVLLQSDTTELQ-E 736
            ..|:..||     .|::|.....|          |:.|.......|....:..|.:.|.|::: .
 Worm   226 DEKTRQLQKVIRNVCLDREKMKMDFSWMSDYPAHHVLRCMFSHKSYDFEIIESLSKVDPTDVELT 290

  Fly   737 AVKVRECQEKA--------------LQSLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEML 787
            .:..:.|.|.|              .|.:.:..|.||..|..:......|:.||.:...|.:..:
 Worm   291 YMFAQSCFEYAGKRFQGDILKITDHFQQVLSNDLHHYYITEQRRERYFQRLTDLMKVNNLIQRSI 355

  Fly   788 --TIKTRD-GADFNLL 800
              |...|: |..||:|
 Worm   356 WETRSRRELGRVFNIL 371

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr39	NP_476932.1	NR_DBD_Lrh-1_like	376..468	CDD:143541	22/101 (22%)
		NR_LBD_F2	617..779	CDD:132728	35/191 (18%)
nhr-226	NP_503630.1	ZnF_C4	7..69	CDD:197701	18/74 (24%)
		Hormone_recep	157..361	CDD:278530	40/242 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910