Protein Alignment Hr39 and nhr-32

DIOPT Version :9

• Sequence 1: NP_476932.1
• Gene: Hr39 / 35398
• FlyBaseID: FBgn0261239
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: NP_510201.2
• Gene: nhr-32 / 187178
• WormBaseID: WBGene00003626
• Length: 414
• Species: Caenorhabditis elegans
• Alignment Length: 432
• Identity: 98/432 - (22%)
• Similarity: 148/432 - (34%)
• Gaps: 125/432 - (28%)

  Fly   376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKG 440
            |.:|||...|||||:.||..|..||:|.|....::.|.|||.|.|..:.|..|.|||..||...|
 Worm    20 CVVCGDAADGFHYGVRSCRGCNAFFRRAVTFNMSFTCRRGGRCPVDKNARCACRACRLAKCYAVG 84

  Fly   441 MKLEAIREDR-----------------TRGGRSTYQCSYTLPNSMLSP--LLSPDQAAAAAAAAA 486
            |..:|::..|                 .|.|.:....||.|.:.|.||  ..:|.....|....|
 Worm    85 MDKKAVQPKREVHTSNGSFDQNDPDYDLRLGGTRTSPSYELSSDMTSPGSAFTPLNINLADFTPA 149

  Fly   487 VASQQQPHQRLHQLNGFGGVPIPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTGSVPPLLQE-I 550
            :.                  |.|     |:..||....|......:..::::..||:..:|.| .
 Worm   150 IP------------------PSP-----PSDSSLIVRQVYDFMEQKRRRRAMLCGSLEEILSEQE 191

  Fly   551 MDVEHLWQYTDAELARINQP---------------------------LSAFASGSSSSSSSSGT- 587
            |.:.|  ..|..:...|.|.                           |.|||.......:...|
 Worm   192 MTLRH--PATSEDFTTIFQAQMVLMFEWVEKLPEFRMLCDHNDKTKLLRAFALKYMLLDNVYHTY 254

  Fly   588 SSGAHAQL----TNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDD 648
            ..|...:|    .|.::....::..|.           :|.|..            ..::|...:
 Worm   255 ELGFRDRLVLVNNNYIVPGVPINFKGS-----------DVVDEN------------QMRDIMFGE 296

  Fly   649 QICLLINSWCELLL----FSCCFRSIDT--------PGEIKMSQGRKITLSQAKSNGLQTCIERM 701
            .:..|||   ||:|    .:..:..|.|        ||.:::|:       .||:...:.|...|
 Worm   297 PMRALIN---ELVLPIGSQNMLYGEIMTIRRIMFWNPGNVQLSE-------MAKALSAEACNVAM 351

  Fly   702 LNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTE---LQEAVKV 740
            ..|..:|....||..|.....:::||.|.||.   :.|.|::
 Worm   352 KELQQYLISEGVDDIEARIKFILLLLPSFTTHHKTMYEIVRL 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr39	NP_476932.1	NR_DBD_Lrh-1_like	376..468	CDD:143541	38/108 (35%)
		NR_LBD_F2	617..779	CDD:132728	30/139 (22%)
nhr-32	NP_510201.2	NR_DBD_HNF4A	20..95	CDD:143518	32/74 (43%)
		NR_LBD	201..382	CDD:132726	37/213 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910