Protein Alignment Hr39 and nhr-175

DIOPT Version :9

• Sequence 1: NP_476932.1
• Gene: Hr39 / 35398
• FlyBaseID: FBgn0261239
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: NP_506438.2
• Gene: nhr-175 / 184255
• WormBaseID: WBGene00008630
• Length: 374
• Species: Caenorhabditis elegans
• Alignment Length: 469
• Identity: 88/469 - (18%)
• Similarity: 153/469 - (32%)
• Gaps: 159/469 - (33%)

  Fly   348 SNLDTVGLGSSHPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVC 412
            |.::..|:..|:|.|.........::..|.:|||::.....|..:|..|..||:|.:.|...|.|
 Worm     5 SRVEKTGIAYSYPPSTPSPEWFPELSENCAVCGDRVHSVRLGSPACLGCIVFFRRAIINVSKYKC 69

  Fly   413 VRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQ 477
            ::.|.|.::...|..|.|||.:||||.|||..|::.....|           |..:..|
 Worm    70 LKDGDCLINYEFRSSCRACRLQKCLQVGMKQSAVKRRDCLG-----------PRKVTPP------ 117

  Fly   478 AAAAAAAAAVASQQQPHQRLHQLNGFGGVPIPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTGS 542
               .||:.....|::|...:.|
 Worm   118 ---TAASTPPVVQRKPESYIIQ------------------------------------------- 136

  Fly   543 VPPLLQEIMDVEHLWQYTDAELARINQPLSAFASGSSSSSSSSGTSSGAHAQLTNPLLASAGLSS 607
               .|.:|.| .|..::.|       |.:|.|...:
 Worm   137 ---NLVKIQD-RHFEEHRD-------QSVSEFRRAT----------------------------- 161

  Fly   608 NGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSI-D 671
                     ::.:..|....:...::|......|:.|..:||.|::.......|:....||:| :
 Worm   162 ---------VSDVNKVLKWSINNAIEWASQFSPFQLIMNEDQKCVISEYGFAFLVVDQAFRTISE 217

  Fly   672 TPGEIKMSQGRKITLSQAKSNGLQTCIERMLNLTDHLRR-------------------------- 710
            ||......|           ||.....:.:..|||...:
 Worm   218 TPNGCWYLQ-----------NGTYLNSDYLYGLTDEAAKFSNSSIRKHSEFVKSLEKTIKIPFEI 271

  Fly   711 LRVDRYEYVAMKVIVLLQSD------TTELQEAVKVRECQEKALQSLQAYTLAHYPDT-PSKFGE 768
            :.:|.:|..|:|.::|:...      ..:.||  |:...:.|.|..|..|...:|||| ..::|:
 Worm   272 MDIDTFEIAALKSLLLVSPSFPKWTIFADYQE--KMVSLKNKCLNELMEYLQLNYPDTFMERYGQ 334

  Fly   769 LLLRIPDLQRTCQL 782
            |:|.:.:::...:|
 Worm   335 LILLLGNIRCAVKL 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr39	NP_476932.1	NR_DBD_Lrh-1_like	376..468	CDD:143541	30/91 (33%)
		NR_LBD_F2	617..779	CDD:132728	38/195 (19%)
nhr-175	NP_506438.2	NR_DBD_HNF4A	33..107	CDD:143518	28/73 (38%)
		HOLI	169..345	CDD:214658	37/188 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910