DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8677 and rsf1

DIOPT Version :9

Sequence 1:NP_001286123.1 Gene:CG8677 / 35397 FlyBaseID:FBgn0026577 Length:2663 Species:Drosophila melanogaster
Sequence 2:XP_031753208.1 Gene:rsf1 / 100485119 XenbaseID:XB-GENE-988570 Length:1488 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8677NP_001286123.1 Ehrlichia_rpt 770..>1243 CDD:118064
PHD_RSF1 1373..1419 CDD:277018
Sox_C_TAD <2107..>2186 CDD:288887
rsf1XP_031753208.1 DDT 23..73 CDD:397084
WHIM1 94..137 CDD:406127
PTZ00121 <347..864 CDD:173412
PHD_RSF1 913..958 CDD:277018
BAH 935..>988 CDD:413397
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007345
OrthoInspector 1 1.000 - - oto104761
Panther 1 1.100 - - LDO PTHR10615
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5459
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.130

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