| Sequence 1: | NP_001260667.1 | Gene: | Atg18b / 35396 | FlyBaseID: | FBgn0032935 | Length: | 471 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_056425.1 | Gene: | WIPI2 / 26100 | HGNCID: | 32225 | Length: | 454 | Species: | Homo sapiens |
| Alignment Length: | 396 | Identity: | 185/396 - (46%) |
|---|---|---|---|
| Similarity: | 243/396 - (61%) | Gaps: | 53/396 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 7 NFNQDFT------------------SLSVLSPTGLRLFSISSQDKVEEIFAKDNTEQIRIVERLF 53
Fly 54 NSSLVVLVTAQKPNCLKMLHFKKKQDICNCFYPSEILCVRMNRQRLIVCLAESIHIHDIRDMKIL 118
Fly 119 HSIENIAPNEQGLCALSLNS---HLAFPVCQTSGELRIFNASKLRTGMTIRAHDTSLSALAFSPS 180
Fly 181 GALLATASERGTVIRVFCVKNGQRVQEFRRGVS-CVRIASLVFSASGDFLCASSNTETVHVFKID 244
Fly 245 TRAVETVELKAIADVAAKSENSAKEAVASTAAEESCRPVASWGGMFSKAV--SSLLLPTQVSEVL 307
Fly 308 AQDRSFATVQLAQGGLKHICALTRVQKEPRLLIACEDGFLYVHEFPAERGGPCKLMSVHDLRGAL 372
Fly 373 EDVIEL 378 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Atg18b | NP_001260667.1 | WD40 | <9..281 | CDD:225201 | 140/293 (48%) |
| WD40 repeat | 79..122 | CDD:293791 | 27/42 (64%) | ||
| WD40 | <89..242 | CDD:295369 | 93/156 (60%) | ||
| WD40 repeat | 130..166 | CDD:293791 | 16/38 (42%) | ||
| WD40 repeat | 172..208 | CDD:293791 | 22/35 (63%) | ||
| WD40 repeat | 212..257 | CDD:293791 | 23/45 (51%) | ||
| WIPI2 | NP_056425.1 | WD 1. /evidence=ECO:0000255 | 15..60 | 13/40 (33%) | |
| WD40 | <37..290 | CDD:225201 | 136/281 (48%) | ||
| WD 2. /evidence=ECO:0000255 | 67..104 | 17/36 (47%) | |||
| WD 3. /evidence=ECO:0000255 | 110..142 | 20/31 (65%) | |||
| WD40 | <116..231 | CDD:295369 | 65/114 (57%) | ||
| WD40 repeat | 120..156 | CDD:293791 | 23/35 (66%) | ||
| WD 4. /evidence=ECO:0000255 | 149..189 | 18/39 (46%) | |||
| WD40 repeat | 161..200 | CDD:293791 | 16/38 (42%) | ||
| WD40 | <184..363 | CDD:295369 | 92/207 (44%) | ||
| WD 5. /evidence=ECO:0000255 | 193..232 | 25/38 (66%) | |||
| WD40 repeat | 206..246 | CDD:293791 | 26/39 (67%) | ||
| WD 6. /evidence=ECO:0000255 | 238..277 | 26/38 (68%) | |||
| FRRG motif. /evidence=ECO:0000303|PubMed:24954904 | 241..244 | 2/2 (100%) | |||
| WD40 repeat | 251..284 | CDD:293791 | 21/57 (37%) | ||
| WD40 repeat | 292..327 | CDD:293791 | 16/34 (47%) | ||
| WD 7. /evidence=ECO:0000255 | 320..359 | 20/38 (53%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG2110 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG54442 | |
| OrthoDB | 1 | 1.010 | - | - | D1216824at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001466 | |
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 1 | 0.900 | - | - | OOG6_103112 | |
| Panther | 1 | 1.100 | - | - | O | PTHR11227 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X1186 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 10 | 9.790 | |||||