Protein Alignment Atg18b and atg1803

DIOPT Version :10

• Sequence 1: NP_610100.1
• Gene: Atg18b / 35396
• FlyBaseID: FBgn0032935
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_594700.1
• Gene: atg1803 / 2543338
• PomBaseID: SPAC458.06
• Length: 364
• Species: Schizosaccharomyces pombe
• Alignment Length: 254
• Identity: 68/254 - (26%)
• Similarity: 129/254 - (50%)
• Gaps: 19/254 - (7%)

  Fly     2 TTYQMNFNQDFTSLSVLSPTGLRLFSISS-QDKVEEIFAKDNTEQIRIVERLFNSSLVVLV---- 61
            |...::.|||.:.:||...||.::|.|:. :.:.:..|   |...:.||:.||.|::::||
pombe     3 TINTVSLNQDASCMSVALDTGYKIFQINPLKLRAQRQF---NDGGLSIVKMLFRSNVLLLVGGGG 64

  Fly    62 -TAQKPNCLKMLHFKKKQDICNCFYPSEILCVRMNRQRLIVCLAESIHIHDI-RDMKILHSIENI 124
             ....||.|.:....|::.:.......||..:..:.:.|.:..|..:.::.. .::|:...::
pombe    65 NPKYAPNKLIVWDDVKERPVKELELNFEIKGICFDGKLLAIATASKLFLYQFGNNLKLQRCLD-- 127

  Fly   125 APNEQGLCALSL---NSHLAFPVCQTSGELRIFNASK--LRTGMTIRAHDTSLSALAFSPSGALL 184
            ..|.:||||:..   .:.:.|| .:..|:|:|....|  :.|.: :.|||:.:|.|..|.:|:.:
pombe   128 TQNPKGLCAMVTTVEKTAIVFP-SRKVGQLQILFLFKDHMNTSI-VPAHDSEISCLGISKTGSKI 190

  Fly   185 ATASERGTVIRVFCVKNGQRVQEFRRGVSCVRIASLVFSASGDFLCASSNTETVHVFKI 243
            |::|..||:||::..:.|:::.|||||.....:..|.||.....|..:|..||:|:|.:
pombe   191 ASSSTNGTLIRIWNSETGEKICEFRRGYQHTAVCQLAFSPDELLLACASKKETLHIFSL 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg18b	NP_610100.1	WD40 repeat	79..122	CDD:293791	5/43 (12%)
		WD40 repeat	130..166	CDD:293791	11/40 (28%)
		WD40	<149..>251	CDD:441893	33/97 (34%)
		WD40 repeat	172..208	CDD:293791	11/35 (31%)
		WD40 repeat	212..257	CDD:293791	9/32 (28%)
atg1803	NP_594700.1	WD40	58..>239	CDD:475233	46/184 (25%)
		WD40 repeat	93..127	CDD:293791	4/33 (12%)
		WD40	<172..>251	CDD:441893	28/78 (36%)
		WD40 repeat	179..220	CDD:293791	16/40 (40%)
		WD40 repeat	223..260	CDD:293791	9/27 (33%)